smiles_to_isoconfs.py

This module generates stereoisomers from SMILES string, using RDKit and reasonable 3D structures using OpenBabel.

Parameter / Method Tool Description
StereoEnumerationOptions RDkit Generate possible stereoisomers for a molecule.
--gen3d Open Babel Generate 3D coordinates.
--confab Open Babel Generate diverse low-energy conformers.
-m Open Babel Convert and store multiple input files.